Basic Information
Locus ID:
gene:TRIDC4AG006870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 40569472 | 40571445 | + | gene:TRIDC4AG006870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 23,669.11 Da | 57.43 | 69.71 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 161 | 203 | 2.78257E-17 | - |
| Pfam | PF13639 | Ring finger domain | 161 | 203 | 5.9E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 161 | 207 | 3.53E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 120 | 208 | 1.5E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 162 | 202 | 1.2E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 162 | 203 | 12.592549 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 131 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49850.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037419919.1 | probable E3 ubiquitin-protein ligase RHY1A [Triticum dicoccoides] | 0 |
| Q852U6 | Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RHY1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HNV6 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG006870.