Basic Information
Locus ID:
gene:TRIDC4AG006850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 40497978 | 40500414 | - | gene:TRIDC4AG006850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 64,902.56 Da | 43.84 | 81.67 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 6 | 96 | 3.7E-10 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 175 | 431 | 5.1E-86 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 4 | 97 | 7.3E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 2 | 114 | 7.2E-15 | IPR011333 |
| SMART | SM00225 | BTB_4 | 12 | 104 | 8.6E-5 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 175 | 455 | 85.257927 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 12 | 80 | 11.874514 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 502 | - | - |
| Coils | Coil | Coil | 495 | 515 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67385.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037419918.1 | BTB/POZ domain-containing protein SR1IP1-like [Triticum dicoccoides] | 0 |
| Q66GP0 | BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana OX=3702 GN=SR1IP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6HRN1 | BTB/POZ domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG006850.