Basic Information
Locus ID:
gene:TRIDC4AG003660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 18345117 | 18347828 | - | gene:TRIDC4AG003660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 80,368.57 Da | 37.83 | 80.93 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 15 | 89 | 1.37539E-17 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 413 | 677 | 7.21755E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 411 | 671 | 1.4E-51 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 17 | 114 | 2.0E-16 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 14 | 117 | 8.38E-21 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 675 | 4.51E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 393 | 480 | 3.0E-29 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 3 | 86 | 2.2E-10 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 481 | 693 | 6.3E-59 | - |
| SMART | SM00220 | serkin_6 | 407 | 675 | 2.2E-35 | IPR000719 |
| SMART | SM00108 | blect_4 | 2 | 89 | 0.0013 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 7 | 713 | 1.6E-181 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 407 | 689 | 38.293964 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1 | 87 | 14.19256 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 257 | 344 | 7.49889 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 526 | 538 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 413 | 434 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_037419722.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Triticum dicoccoides] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HPJ6 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG003660.