Basic Information
Locus ID:
gene:TRIDC4AG000050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 770869 | 773824 | + | gene:TRIDC4AG000050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 96,558.27 Da | 35.91 | 80.79 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 553 | 820 | 4.73463E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 552 | 816 | 1.3E-47 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 39 | 421 | 1.5E-23 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 526 | 822 | 1.75E-77 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 35 | 198 | 1.6E-19 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 221 | 421 | 9.8E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 623 | 833 | 2.8E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 510 | 622 | 1.5E-33 | - |
| SMART | SM00220 | serkin_6 | 547 | 822 | 8.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 547 | 822 | 36.428276 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 553 | 575 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 668 | 680 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04690.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_037423992.1 | receptor-like protein kinase ANXUR1 [Triticum dicoccoides] | 0 |
| Q9SR05 | Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana OX=3702 GN=ANX1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HQY3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG000050.