Basic Information
Locus ID:
gene:TRIDC3BG087020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 835776117 | 835789285 | + | gene:TRIDC3BG087020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 87,041.77 Da | 41.78 | 86.74 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 484 | 610 | 6.74814E-20 | IPR038005 |
| Pfam | PF00069 | Protein kinase domain | 3 | 250 | 3.6E-41 | IPR000719 |
| Pfam | PF18052 | Rx N-terminal domain | 485 | 566 | 1.4E-16 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 669 | 749 | 1.2E-10 | IPR002182 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 277 | 371 | 1.6E-13 | IPR000535 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 254 | 3.91E-56 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 629 | 747 | 2.35E-17 | IPR027417 |
| SUPERFAMILY | SSF49354 | PapD-like | 271 | 397 | 1.54E-18 | IPR008962 |
| Gene3D | G3DSA:3.40.50.300 | - | 623 | 752 | 4.4E-16 | IPR027417 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 271 | 392 | 2.7E-21 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 270 | 7.8E-59 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 484 | 594 | 3.1E-22 | - |
| SMART | SM00220 | serkin_6 | 4 | 252 | 2.9E-13 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 274 | 392 | 17.794134 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 259 | 29.064463 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 118 | 130 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.3 | - | 0 |
| RefSeq | XP_037416319.1 | disease resistance protein RGA5-like isoform X1 [Triticum dicoccoides] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6FZK7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG087020.