Basic Information
Locus ID:
gene:TRIDC3BG085960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 831209877 | 831212627 | + | gene:TRIDC3BG085960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 81,446.73 Da | 35.50 | 84.42 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 348 | 381 | 5.05311E-8 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 47 | 78 | 2.1E-8 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 348 | 388 | 4.4E-6 | IPR001881 |
| Pfam | PF00069 | Protein kinase domain | 458 | 720 | 4.1E-45 | IPR000719 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 296 | 390 | 1.19E-8 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 723 | 1.5E-66 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 301 | 350 | 4.1E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 530 | 730 | 3.0E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 438 | 529 | 1.2E-20 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 351 | 392 | 8.8E-12 | - |
| SMART | SM00179 | egfca_6 | 348 | 389 | 1.4E-9 | IPR001881 |
| SMART | SM00220 | serkin_6 | 455 | 724 | 1.7E-29 | IPR000719 |
| SMART | SM00181 | egf_5 | 295 | 347 | 10.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 351 | 389 | 0.0022 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 348 | 389 | 9.800396 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 455 | 726 | 35.778114 | IPR000719 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 364 | 375 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 578 | 590 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 461 | 483 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 348 | 373 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037416254.1 | wall-associated receptor kinase 1-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | W5CQN2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF074300010CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG085960.