Basic Information
Locus ID:
gene:TRIDC3BG085710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 829978741 | 829990775 | + | gene:TRIDC3BG085710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 175,581.95 Da | 40.65 | 99.03 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 602 | 730 | 3.21612E-22 | IPR038005 |
| Pfam | PF00931 | NB-ARC domain | 790 | 1014 | 8.8E-39 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 605 | 690 | 1.3E-17 | IPR041118 |
| Pfam | PF00069 | Protein kinase domain | 111 | 376 | 3.9E-47 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 406 | 493 | 6.9E-15 | IPR000535 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 753 | 1028 | 1.78E-60 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1092 | 1464 | 1.73E-27 | - |
| SUPERFAMILY | SSF49354 | PapD-like | 393 | 529 | 4.45E-22 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 100 | 381 | 4.05E-66 | IPR011009 |
| Gene3D | G3DSA:1.20.5.4130 | - | 604 | 715 | 1.1E-23 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 750 | 918 | 5.7E-31 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 927 | 1012 | 1.3E-12 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1158 | 1505 | 1.5E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 91 | 183 | 1.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 206 | 401 | 1.1E-47 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 1013 | 1105 | 5.3E-14 | IPR036388 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 402 | 525 | 1.2E-23 | IPR013783 |
| SMART | SM00220 | serkin_6 | 111 | 381 | 1.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 111 | 388 | 34.477787 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 403 | 521 | 17.225863 | IPR000535 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 117 | 138 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 794 | 809 | 6.9E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 866 | 880 | 6.9E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 963 | 977 | 6.9E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1352 | 1368 | 6.9E-15 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044352413.1 | disease resistance protein RGA5-like isoform X1 [Triticum aestivum] | 0 |
| Q2R8L1 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A080YUG9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF278900040CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG085710.