Basic Information
Locus ID:
gene:TRIDC3BG085690
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 829814150 | 829824036 | - | gene:TRIDC3BG085690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 146,865.36 Da | 43.99 | 97.12 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 362 | 490 | 7.46414E-20 | IPR038005 |
| Pfam | PF00931 | NB-ARC domain | 549 | 775 | 1.0E-39 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 1 | 128 | 2.0E-20 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 161 | 254 | 4.6E-13 | IPR000535 |
| Pfam | PF18052 | Rx N-terminal domain | 365 | 449 | 1.6E-16 | IPR041118 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 140 | 5.82E-29 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 852 | 1227 | 2.21E-27 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 511 | 788 | 2.79E-59 | IPR027417 |
| SUPERFAMILY | SSF49354 | PapD-like | 144 | 277 | 8.11E-19 | IPR008962 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 152 | 3.3E-31 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 513 | 680 | 1.3E-30 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 768 | 866 | 6.0E-14 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 910 | 1236 | 7.7E-27 | IPR032675 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 153 | 276 | 3.8E-22 | IPR013783 |
| Gene3D | G3DSA:1.20.5.4130 | - | 364 | 475 | 7.1E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 140 | 17.644192 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 154 | 272 | 15.980038 | IPR000535 |
| PRINTS | PR00364 | Disease resistance protein signature | 723 | 737 | 5.0E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 554 | 569 | 5.0E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 626 | 640 | 5.0E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 975 | 991 | 5.0E-14 | - |
| Coils | Coil | Coil | 133 | 153 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_037416229.1 | disease resistance protein RGA5-like isoform X1 [Triticum dicoccoides] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A080YUG7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF278900010CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG085690.