Basic Information
Locus ID:
gene:TRIDC3BG082640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 816546070 | 816546727 | - | gene:TRIDC3BG082640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 8,997.32 Da | 23.21 | 105.80 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 8 | 76 | 5.8E-26 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 78 | 1.59E-26 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 81 | 2.3E-33 | - |
| SMART | SM00213 | ubq_7 | 6 | 77 | 2.6E-24 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 6 | 76 | 21.154011 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 37 | 57 | 3.2E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 16 | 36 | 3.2E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 58 | 79 | 3.2E-23 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_037418648.1 | polyubiquitin-like [Triticum dicoccoides] | 0 |
| P69310 | Ubiquitin OS=Avena sativa OX=4498 PE=1 SV=1 | 0 | |
| TrEMBL | A0A080YTX6 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF089500110CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG082640.