Basic Information
Locus ID:
gene:TRIDC3BG082620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 816246306 | 816257692 | - | gene:TRIDC3BG082620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 115,290.79 Da | 41.66 | 94.76 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 590 | 733 | 1.4E-13 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 401 | 476 | 9.6E-9 | IPR041118 |
| Pfam | PF00069 | Protein kinase domain | 38 | 304 | 1.1E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 307 | 8.31E-62 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 573 | 772 | 1.06E-26 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 844 | 1015 | 2.55E-9 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 753 | 851 | 1.1E-9 | IPR036388 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 320 | 9.5E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 110 | 9.9E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 862 | 1016 | 1.2E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.5.4130 | - | 400 | 506 | 1.4E-11 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 567 | 721 | 1.2E-18 | IPR027417 |
| SMART | SM00220 | serkin_6 | 38 | 311 | 8.8E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 310 | 32.329418 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 597 | 612 | 1.6E-5 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 669 | 683 | 1.6E-5 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1005 | 1016 | 1.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61480.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_020157209.1 | disease resistance protein RGA5-like [Aegilops tauschii subsp. strangulata] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453GSB0 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG082620.