Basic Information
Locus ID:
gene:TRIDC3BG082370
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 815114474 | 815118010 | + | gene:TRIDC3BG082370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.24 | 29,251.39 Da | 56.10 | 63.56 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 205 | 264 | 4.3E-15 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 140 | 199 | 2.6E-12 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 123 | 200 | 1.95E-17 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 199 | 264 | 4.05E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 131 | 202 | 8.0E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 203 | 264 | 1.1E-21 | - |
| SMART | SM00213 | ubq_7 | 203 | 264 | 3.7E-4 | IPR000626 |
| SMART | SM00213 | ubq_7 | 138 | 202 | 1.5E-11 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 203 | 264 | 15.753712 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 138 | 199 | 12.944685 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 235 | 255 | 7.6E-12 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 214 | 234 | 7.6E-12 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 124 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_037416032.1 | polyubiquitin-like isoform X1 [Triticum dicoccoides] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A080YTV2 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF078700160CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG082370.