Basic Information
Locus ID:
gene:TRIDC3BG082060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 813099959 | 813103373 | - | gene:TRIDC3BG082060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 28,261.17 Da | 47.48 | 77.87 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 76 | 135 | 3.79644E-13 | - |
| Pfam | PF00240 | Ubiquitin family | 76 | 135 | 5.3E-13 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 147 | 213 | 3.5E-17 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 139 | 218 | 4.37E-19 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 217 | 254 | 2.37E-7 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 69 | 138 | 1.69E-17 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 221 | 254 | 3.3E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 66 | 136 | 3.0E-17 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 137 | 220 | 3.4E-25 | - |
| SMART | SM00213 | ubq_7 | 74 | 138 | 8.7E-13 | IPR000626 |
| SMART | SM00213 | ubq_7 | 141 | 212 | 3.5E-16 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 74 | 140 | 11.943017 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 139 | 212 | 17.343315 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 171 | 191 | 1.3E-12 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 150 | 170 | 1.3E-12 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 44 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_037418639.1 | polyubiquitin-like [Triticum dicoccoides] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A080YTT2 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF025800040CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG082060.