Basic Information
Locus ID:
gene:TRIDC3BG082050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812892688 | 812894102 | + | gene:TRIDC3BG082050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 27,736.90 Da | 40.41 | 100.66 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 37 | 96 | 9.8E-7 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 187 | 242 | 1.4E-11 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 107 | 172 | 9.7E-16 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 176 | 242 | 1.2E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 23 | 97 | 1.47E-14 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 99 | 172 | 5.8E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 97 | 180 | 8.3E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 19 | 96 | 1.5E-13 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 181 | 243 | 1.3E-14 | - |
| SMART | SM00213 | ubq_7 | 35 | 99 | 5.1E-5 | IPR000626 |
| SMART | SM00213 | ubq_7 | 102 | 173 | 6.5E-15 | IPR000626 |
| SMART | SM00213 | ubq_7 | 182 | 242 | 0.07 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 182 | 244 | 12.857583 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 100 | 172 | 15.601284 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 35 | 96 | 8.742033 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 132 | 152 | 1.8E-9 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 111 | 131 | 1.8E-9 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_037418638.1 | polyubiquitin 11-like [Triticum dicoccoides] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A080YTT3 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF025800050CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG082050.