Basic Information
Locus ID:
gene:TRIDC3BG082020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812831000 | 812835502 | + | gene:TRIDC3BG082020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 18,833.82 Da | 58.15 | 107.44 | 0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06803 | Protein of unknown function (DUF1232) | 114 | 147 | 5.3E-8 | IPR010652 |
| SUPERFAMILY | SSF57850 | RING/U-box | 4 | 43 | 8.25E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 71 | 3.8E-8 | IPR013083 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 9 | 18 | - | IPR017907 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22510.1 | RING/U-box protein with domain of unknown function (DUF 1232). | 0 |
| RefSeq | XP_037417039.1 | E3 ubiquitin-protein ligase RNF170-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A8R7U2H0 | E3 ubiquitin-protein ligase RNF170 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG082020.