Basic Information
Locus ID:
gene:TRIDC3BG082010
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812823278 | 812824511 | - | gene:TRIDC3BG082010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 27,495.43 Da | 37.53 | 93.39 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 175 | 242 | 4.1E-17 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 98 | 163 | 3.8E-16 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 28 | 87 | 2.9E-11 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 89 | 163 | 1.69E-15 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 21 | 90 | 1.17E-16 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 166 | 242 | 4.88E-21 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 173 | 242 | 4.4E-24 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 18 | 89 | 4.2E-17 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 90 | 171 | 2.1E-21 | - |
| SMART | SM00213 | ubq_7 | 26 | 90 | 1.3E-9 | IPR000626 |
| SMART | SM00213 | ubq_7 | 173 | 242 | 1.7E-13 | IPR000626 |
| SMART | SM00213 | ubq_7 | 93 | 164 | 1.5E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 173 | 242 | 17.169111 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 91 | 163 | 15.339979 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 26 | 87 | 9.395295 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 226 | 242 | 3.3E-10 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 183 | 203 | 3.3E-10 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_044337984.1 | polyubiquitin-like [Triticum aestivum] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6H3Z9 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG082010.