Basic Information
Locus ID:
gene:TRIDC3BG082000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812814205 | 812815130 | - | gene:TRIDC3BG082000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 19,036.65 Da | 32.60 | 103.86 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 81 | 141 | 6.7E-16 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 3 | 62 | 6.1E-14 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 63 | 1.62E-16 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 74 | 140 | 6.22E-17 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 67 | 147 | 4.5E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 66 | 1.2E-18 | - |
| SMART | SM00213 | ubq_7 | 68 | 140 | 4.8E-11 | IPR000626 |
| SMART | SM00213 | ubq_7 | 1 | 65 | 1.1E-12 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 82 | 139 | 15.013348 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 62 | 11.790588 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 78 | 98 | 5.3E-7 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 99 | 119 | 5.3E-7 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_044354718.1 | polyubiquitin-like [Triticum aestivum] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7U2W6 | Polyubiquitin OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG082000.