Basic Information
Locus ID:
gene:TRIDC3BG081950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812709647 | 812710420 | + | gene:TRIDC3BG081950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 17,572.43 Da | 36.29 | 111.66 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 3 | 73 | 4.2E-18 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 84 | 154 | 1.6E-27 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 81 | 156 | 1.9E-28 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 73 | 2.01E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 78 | 1.0E-24 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 79 | 157 | 1.9E-33 | - |
| SMART | SM00213 | ubq_7 | 1 | 74 | 9.0E-17 | IPR000626 |
| SMART | SM00213 | ubq_7 | 82 | 153 | 8.6E-28 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 73 | 16.733604 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 82 | 157 | 24.550972 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 108 | 133 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 92 | 112 | 2.9E-25 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 113 | 133 | 2.9E-25 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 134 | 155 | 2.9E-25 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_044345757.1 | polyubiquitin-like [Triticum aestivum] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A080YTW4 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF032800040CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG081950.