Basic Information
Locus ID:
gene:TRIDC3BG081930
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812669178 | 812680039 | + | gene:TRIDC3BG081930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 23,204.35 Da | 44.26 | 91.72 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 131 | 201 | 2.0E-22 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 1 | 42 | 1.1E-8 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 55 | 118 | 8.8E-16 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 125 | 203 | 3.38E-25 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 45 | 5.29E-10 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 44 | 118 | 4.65E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 43 | 8.3E-11 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 126 | 204 | 2.0E-29 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 44 | 125 | 5.1E-25 | - |
| SMART | SM00213 | ubq_7 | 48 | 119 | 1.9E-14 | IPR000626 |
| SMART | SM00213 | ubq_7 | 129 | 200 | 7.8E-22 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 46 | 118 | 16.646502 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 129 | 204 | 20.979807 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 16 | 42 | 10.440514 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 181 | 202 | 3.2E-21 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 160 | 180 | 3.2E-21 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 139 | 159 | 3.2E-21 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_044345756.1 | polyubiquitin-like [Triticum aestivum] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453GS00 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG081930.