Basic Information
Locus ID:
gene:TRIDC3BG081900
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812517205 | 812551598 | + | gene:TRIDC3BG081900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 44,551.40 Da | 44.83 | 81.12 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 9 | 73 | 8.0E-17 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 243 | 307 | 1.3E-18 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 86 | 147 | 1.4E-19 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 166 | 232 | 7.4E-18 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 80 | 146 | 3.15E-21 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 76 | 5.07E-19 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 152 | 232 | 1.01E-18 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 233 | 307 | 1.08E-19 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 155 | 239 | 1.5E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 82 | 2.7E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 240 | 307 | 3.0E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 83 | 154 | 4.4E-27 | - |
| SMART | SM00213 | ubq_7 | 84 | 159 | 1.9E-18 | IPR000626 |
| SMART | SM00213 | ubq_7 | 1 | 74 | 2.9E-14 | IPR000626 |
| SMART | SM00213 | ubq_7 | 160 | 233 | 2.0E-18 | IPR000626 |
| SMART | SM00213 | ubq_7 | 241 | 307 | 4.8E-14 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 73 | 17.691721 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 84 | 144 | 19.695059 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 241 | 307 | 18.715164 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 160 | 232 | 17.60462 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 136 | 157 | 7.8E-19 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 94 | 114 | 7.8E-19 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 115 | 135 | 7.8E-19 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 400 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.3 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_044359713.1 | polyubiquitin-like isoform X2 [Triticum aestivum] | 0 |
| P69309 | Polyubiquitin OS=Avena fatua OX=4499 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453GRX6 | Polyubiquitin OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG081900.