Basic Information
Locus ID:
gene:TRIDC3BG081880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812496908 | 812500611 | - | gene:TRIDC3BG081880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 36,952.36 Da | 47.26 | 86.40 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 260 | 330 | 3.0E-25 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 113 | 173 | 2.6E-11 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 179 | 249 | 5.4E-18 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 95 | 174 | 3.17E-15 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 250 | 332 | 1.55E-26 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 174 | 249 | 3.22E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 107 | 174 | 3.4E-14 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 253 | 333 | 5.5E-31 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 175 | 248 | 1.9E-26 | - |
| SMART | SM00213 | ubq_7 | 177 | 250 | 2.1E-17 | IPR000626 |
| SMART | SM00213 | ubq_7 | 111 | 176 | 8.2E-7 | IPR000626 |
| SMART | SM00213 | ubq_7 | 258 | 329 | 2.4E-27 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 177 | 249 | 17.03846 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 258 | 333 | 23.919485 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 143 | 173 | 10.353413 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 284 | 309 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 268 | 288 | 3.8E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 310 | 331 | 3.8E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 289 | 309 | 3.8E-23 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 107 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_044359706.1 | polyubiquitin-like isoform X1 [Triticum aestivum] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453GRY2 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG081880.