Basic Information
Locus ID:
gene:TRIDC3BG081840
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 812182507 | 812184568 | + | gene:TRIDC3BG081840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 17,851.64 Da | 36.84 | 99.94 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 3 | 76 | 3.1E-22 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 83 | 150 | 1.4E-24 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 75 | 151 | 2.3E-24 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 77 | 7.56E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 79 | 2.4E-26 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 80 | 156 | 3.8E-30 | - |
| SMART | SM00213 | ubq_7 | 1 | 74 | 5.2E-17 | IPR000626 |
| SMART | SM00213 | ubq_7 | 81 | 152 | 1.8E-23 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 81 | 148 | 21.850822 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 73 | 19.150673 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 133 | 154 | 2.2E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 112 | 132 | 2.2E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 91 | 111 | 2.2E-23 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_044343276.1 | polyubiquitin 11-like [Triticum aestivum] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453GRT5 | Polyubiquitin-like OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG081840.