Basic Information
Locus ID:
gene:TRIDC3BG078000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of unknown function (DUF3420)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 789380796 | 789383751 | + | gene:TRIDC3BG078000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 54,332.34 Da | 45.35 | 89.28 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18310 | BTB_POZ_NPR_plant | 8 | 193 | 1.77461E-48 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 301 | 383 | 8.7E-12 | IPR020683 |
| Pfam | PF11900 | Domain of unknown function (DUF3420) | 228 | 262 | 1.1E-8 | IPR024228 |
| Pfam | PF00651 | BTB/POZ domain | 16 | 57 | 1.7E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 11 | 222 | 6.28E-18 | IPR011333 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 311 | 396 | 9.8E-19 | IPR036770 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 226 | 2.7E-24 | IPR011333 |
| Gene3D | G3DSA:1.25.40.20 | - | 282 | 401 | 2.2E-21 | IPR036770 |
| SMART | SM00248 | ANK_2a | 353 | 382 | 1.9E-4 | IPR002110 |
| SMART | SM00225 | BTB_4 | 25 | 193 | 7.4E-19 | IPR000210 |
| SMART | SM00248 | ANK_2a | 318 | 348 | 0.0081 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 353 | 383 | 9.967073 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 353 | 385 | 10.926559 | IPR002110 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 25 | 140 | 16.465918 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 516 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41370.1 | Ankyrin repeat family protein / BTB/POZ domain-containing protein. Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1. | 0 |
| RefSeq | XP_037415843.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR5-like [Triticum dicoccoides] | 0 |
| A2CIR7 | BTB/POZ domain and ankyrin repeat-containing protein NPR5 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR5 PE=1 SV=1 | 0 | |
| TrEMBL | W5D2I5 | BTB domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF089000240CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG078000.