Basic Information
Locus ID:
gene:TRIDC3BG077410
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 784757882 | 784761776 | + | gene:TRIDC3BG077410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 46,302.73 Da | 40.99 | 76.49 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 193 | 222 | 0.0045 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 370 | 405 | 0.034 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 79 | 411 | 4.53E-43 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 56 | 171 | 3.6E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 180 | 284 | 2.3E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 285 | 440 | 7.3E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 226 | 263 | 0.032 | IPR001680 |
| SMART | SM00320 | WD40_4 | 320 | 357 | 0.057 | IPR001680 |
| SMART | SM00320 | WD40_4 | 185 | 223 | 0.007 | IPR001680 |
| SMART | SM00320 | WD40_4 | 363 | 406 | 0.75 | IPR001680 |
| SMART | SM00320 | WD40_4 | 271 | 315 | 73.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 62 | 103 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 106 | 144 | 6.5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 191 | 232 | 10.775796 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51930.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037418496.1 | protein JINGUBANG-like [Triticum dicoccoides] | 0 |
| O48716 | Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FWT3 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG077410.