Basic Information
Locus ID:
gene:TRIDC3BG073780
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
protein Sb04g004280 source
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 760370311 | 760374359 | - | gene:TRIDC3BG073780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 25,560.35 Da | 43.14 | 92.62 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 84 | 153 | 8.8E-20 | IPR000626 |
| Pfam | PF14560 | Ubiquitin-like domain | 155 | 198 | 0.0055 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 3 | 72 | 3.1E-19 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 153 | 201 | 2.54E-8 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 73 | 1.63E-21 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 79 | 153 | 2.9E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 77 | 4.2E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 78 | 153 | 1.4E-24 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 154 | 215 | 5.5E-8 | - |
| SMART | SM00213 | ubq_7 | 81 | 152 | 1.7E-18 | IPR000626 |
| SMART | SM00213 | ubq_7 | 1 | 72 | 1.9E-22 | IPR000626 |
| SMART | SM00213 | ubq_7 | 154 | 220 | 5.0 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 154 | 201 | 8.589605 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 72 | 18.671614 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 81 | 152 | 20.413647 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 27 | 52 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 91 | 111 | 6.8E-17 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 133 | 154 | 6.8E-17 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 112 | 132 | 6.8E-17 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_037415667.1 | polyubiquitin 11-like [Triticum dicoccoides] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A077S445 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF101600010CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG073780.