HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC3BG073430
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
3B 757998946 758000454 - gene:TRIDC3BG073430
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.58 20,439.12 Da 52.09 95.93 -0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00651 BTB/POZ domain 11 42 1.5E-4 IPR000210
SUPERFAMILY SSF54695 POZ domain 8 111 1.94E-9 IPR011333
Gene3D G3DSA:1.25.40.420 - 113 182 2.6E-18 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 1 105 2.0E-12 IPR011333
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06190.1 BTB-POZ and MATH domain 2. 0
RefSeq XP_044342969.1 BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] 0
Swiss-Prot Q9M8J9 BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 0
TrEMBL A0A3B6EQQ0 BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC3BG073430.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.