Basic Information
Locus ID:
gene:TRIDC3BG069760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBC27
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 736028741 | 736032878 | - | gene:TRIDC3BG069760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 23,240.97 Da | 45.66 | 78.68 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14312 | UBA_II_E2_UBC27_like | 175 | 210 | 2.12989E-17 | IPR041974 |
| CDD | cd00195 | UBCc | 20 | 163 | 3.96409E-50 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 22 | 162 | 2.0E-42 | IPR000608 |
| Pfam | PF00627 | UBA/TS-N domain | 175 | 208 | 6.0E-9 | IPR015940 |
| SUPERFAMILY | SSF54495 | UBC-like | 20 | 168 | 2.32E-49 | IPR016135 |
| SUPERFAMILY | SSF46934 | UBA-like | 169 | 212 | 2.17E-10 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 172 | 211 | 2.9E-9 | - |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 16 | 170 | 9.8E-55 | IPR016135 |
| SMART | SM00165 | uba_6 | 174 | 211 | 1.1E-8 | IPR015940 |
| SMART | SM00212 | ubc_7 | 21 | 168 | 3.7E-61 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 18 | 168 | 47.711624 | IPR000608 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 173 | 212 | 13.197515 | IPR015940 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 94 | 110 | - | IPR023313 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50870.1 | ubiquitin-conjugating enzyme 27. | 0 |
| RefSeq | XP_037415490.1 | ubiquitin-conjugating enzyme E2 27-like [Triticum dicoccoides] | 0 |
| Q9FI61 | Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana OX=3702 GN=UBC27 PE=2 SV=1 | 0 | |
| TrEMBL | W5D2H3 | E2 ubiquitin-conjugating enzyme OS=Triticum aestivum OX=4565 GN=TRAES_3BF142600040CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG069760.