Basic Information
Locus ID:
gene:TRIDC3BG069320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 732227996 | 732232341 | - | gene:TRIDC3BG069320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.44 | 53,843.76 Da | 42.04 | 72.14 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 269 | 303 | 0.0044 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 445 | 482 | 7.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 398 | 437 | 3.1E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 205 | 482 | 6.31E-51 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 111 | 349 | 1.1E-25 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 350 | 489 | 2.5E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 262 | 303 | 3.5E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 348 | 387 | 7.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 397 | 437 | 8.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 442 | 482 | 1.3E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 306 | 344 | 2.2E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 270 | 312 | 12.914561 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 404 | 442 | 12.578312 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 404 | 446 | 15.487762 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 270 | 308 | 9.968326 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 424 | 438 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 290 | 304 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 424 | 438 | 6.8E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 469 | 483 | 6.8E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 290 | 304 | 6.8E-8 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 151 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18905.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037415458.1 | uncharacterized WD repeat-containing protein C17D11.16-like isoform X3 [Triticum dicoccoides] | 0 |
| Q9P775 | Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1711.16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FVW0 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG069320.