Basic Information
Locus ID:
gene:TRIDC3BG068200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
progesterone receptor binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 720243688 | 720245470 | + | gene:TRIDC3BG068200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 27,940.90 Da | 60.45 | 74.06 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 194 | 231 | 6.3E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 176 | 238 | 1.3E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 184 | 246 | 5.7E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 194 | 231 | 3.5E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 194 | 232 | 12.371254 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 209 | 218 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07200.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037418258.1 | probable histone acetyltransferase HAC-like 1 [Triticum dicoccoides] | 0 |
| Q6YXY2 | Probable histone acetyltransferase HAC-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0137500 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6FVM3 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG068200.