Basic Information
Locus ID:
gene:TRIDC3BG068170
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 720003237 | 720003693 | + | gene:TRIDC3BG068170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 8,295.75 Da | 32.94 | 70.82 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 18 | 55 | 1.1E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 14 | 68 | 6.19E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 7 | 70 | 3.9E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 18 | 55 | 5.2E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 18 | 56 | 12.164712 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 33 | 42 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037416852.1 | probable histone acetyltransferase HAC-like 1 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A077RZ24 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF091600200CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG068170.