Basic Information
Locus ID:
gene:TRIDC3BG068120
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc-RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 719818129 | 719822965 | + | gene:TRIDC3BG068120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 28,545.98 Da | 56.44 | 78.67 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 208 | 245 | 1.5E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 199 | 252 | 2.12E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 193 | 260 | 2.3E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 208 | 245 | 1.6E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 208 | 246 | 12.474524 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 223 | 232 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07200.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044359129.1 | E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Triticum aestivum] | 0 |
| TrEMBL | A0A077S372 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF091600240CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG068120.