Basic Information
Locus ID:
gene:TRIDC3BG067900
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 717957058 | 717959148 | - | gene:TRIDC3BG067900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 32,454.38 Da | 69.04 | 59.80 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 248 | 285 | 1.13422E-8 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 245 | 291 | 1.9E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 239 | 292 | 2.24E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 222 | 296 | 1.7E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 248 | 285 | 3.7E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 248 | 286 | 11.412309 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 230 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13100.3 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037418247.1 | baculoviral IAP repeat-containing protein 8-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A077RXZ4 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF091100260CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG067900.