Basic Information
Locus ID:
gene:TRIDC3BG067820
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 717317117 | 717323702 | + | gene:TRIDC3BG067820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 143,250.98 Da | 37.12 | 110.15 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1030 | 1298 | 1.29688E-98 | - |
| Pfam | PF13855 | Leucine rich repeat | 677 | 732 | 6.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 588 | 648 | 3.9E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1027 | 1230 | 6.2E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 85 | 9.1E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 441 | 655 | 9.86E-45 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 116 | 514 | 1.26E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1005 | 1297 | 5.06E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 676 | 905 | 1.29E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 517 | 2.4E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1101 | 1306 | 7.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 298 | 6.7E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 666 | 912 | 1.2E-56 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 518 | 663 | 9.4E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 986 | 1100 | 1.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 177 | 1.6E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 743 | 767 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 844 | 867 | 76.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 587 | 608 | 590.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 844 | 870 | 480.0 | - |
| SMART | SM00369 | LRR_typ_2 | 278 | 302 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 635 | 659 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 768 | 792 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 254 | 277 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 230 | 250 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 158 | 56.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 1024 | 1303 | 1.1E-29 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 134 | 153 | 220.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 611 | 637 | 250.0 | - |
| SMART | SM00369 | LRR_typ_2 | 470 | 491 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 587 | 611 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 229 | 8.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 326 | 350 | 39.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 230 | 253 | 140.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 182 | 211 | 64.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 254 | 283 | 660.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1024 | 1309 | 36.555485 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1147 | 1159 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1030 | 1052 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 719 | 732 | 7.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 233 | 246 | 7.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07280.1 | Leucine-rich repeat transmembrane protein kinase. Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. | 0 |
| RefSeq | XP_037415374.1 | leucine-rich repeat receptor protein kinase MSP1-like [Triticum dicoccoides] | 0 |
| Q8RZV7 | Leucine-rich repeat receptor protein kinase MSP1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A077S378 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF046900030CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG067820.