Basic Information
Locus ID:
gene:TRIDC3BG066560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 703691898 | 703876649 | - | gene:TRIDC3BG066560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 49,794.06 Da | 56.84 | 80.87 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 92 | 136 | 2.0E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 174 | 358 | 1.22E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 85 | 145 | 3.4E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 91 | 133 | 2.8E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 165 | 360 | 1.4E-18 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 89 | 136 | 8.649649 | IPR001810 |
| Coils | Coil | Coil | 256 | 279 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05490.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_037415299.1 | putative F-box/LRR-repeat protein 23 [Triticum dicoccoides] | 0 |
| Q9S9V9 | Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1 | 0 | |
| TrEMBL | D8L9I9 | Ubiquitin-protein ligase, putative, expressed OS=Triticum aestivum OX=4565 GN=TAA_ctg0091b.00160.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG066560.