Basic Information
Locus ID:
gene:TRIDC3BG065420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 694010886 | 694032102 | + | gene:TRIDC3BG065420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.61 | 37,558.41 Da | 64.02 | 78.56 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 237 | 249 | 1.4 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 216 | 234 | 0.045 | IPR001611 |
| Pfam | PF12937 | F-box-like | 32 | 78 | 3.7E-10 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 78 | 6.02E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 126 | 253 | 1.57E-13 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 31 | 74 | 4.7E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 107 | 277 | 2.5E-20 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 127 | 152 | 3.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 213 | 237 | 310.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 153 | 178 | 53.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 238 | 264 | 59.0 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 29 | 77 | 11.060639 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05490.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_037418202.1 | putative F-box/LRR-repeat protein 23 [Triticum dicoccoides] | 0 |
| Q9S9V9 | Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1 | 0 | |
| TrEMBL | W5CQJ7 | F-box domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF091300110CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG065420.