Basic Information
Locus ID:
gene:TRIDC3BG065210
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 692080809 | 692085559 | + | gene:TRIDC3BG065210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 69,935.84 Da | 49.70 | 71.91 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 198 | 483 | 2.5E-44 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 196 | 485 | 1.57E-75 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 185 | 496 | 1.4E-80 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 189 | 486 | 46.040009 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 429 | 446 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 81 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24560.1 | ubiquitin-specific protease 16. Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation. | 0 |
| RefSeq | XP_037418196.1 | ubiquitin carboxyl-terminal hydrolase 21-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9P275 | Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens OX=9606 GN=USP36 PE=1 SV=4 | 0 | |
| TrEMBL | A0A3B6FYC3 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG065210.