Basic Information
Locus ID:
gene:TRIDC3BG062410
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 671428030 | 671431880 | - | gene:TRIDC3BG062410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 48,628.07 Da | 70.73 | 87.97 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 330 | 376 | 1.3E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 324 | 376 | 1.51E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 315 | 399 | 1.1E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 333 | 370 | 2.3E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 333 | 371 | 11.943417 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 348 | 357 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24440.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037415041.1 | E3 ubiquitin-protein ligase AIRP2-like [Triticum dicoccoides] | 0 |
| Q9M022 | E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1 | 0 | |
| TrEMBL | K9J8X0 | RING-finger domain containing protein OS=Triticum aestivum OX=4565 GN=RSTR PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG062410.