Basic Information
Locus ID:
gene:TRIDC3BG061750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NLI interacting factor-like phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 665836201 | 665841237 | - | gene:TRIDC3BG061750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 44,004.14 Da | 47.92 | 82.81 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01813 | Ubl_UBLCP1 | 70 | 141 | 1.08566E-26 | - |
| Pfam | PF03031 | NLI interacting factor-like phosphatase | 201 | 362 | 3.7E-26 | IPR004274 |
| Pfam | PF00240 | Ubiquitin family | 73 | 124 | 5.5E-8 | IPR000626 |
| SUPERFAMILY | SSF56784 | HAD-like | 187 | 365 | 3.98E-27 | IPR036412 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 66 | 145 | 1.47E-16 | IPR029071 |
| Gene3D | G3DSA:3.40.50.1000 | - | 152 | 378 | 4.5E-63 | IPR023214 |
| Gene3D | G3DSA:3.10.20.90 | - | 67 | 143 | 4.5E-17 | - |
| SMART | SM00213 | ubq_7 | 70 | 141 | 1.7E-6 | IPR000626 |
| SMART | SM00577 | forpap2 | 198 | 340 | 1.2E-16 | IPR004274 |
| TIGRFAM | TIGR02245 | HAD_IIID1: HAD hydrolase, family IIID | 179 | 373 | 6.7E-102 | IPR011943 |
| ProSiteProfiles | PS50969 | FCP1 homology domain profile. | 195 | 356 | 21.919624 | IPR004274 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 70 | 139 | 9.155766 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 50 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G06599.1 | ubiquitin family protein. | 0 |
| RefSeq | XP_020157041.1 | LOW QUALITY PROTEIN: ubiquitin-like domain-containing CTD phosphatase [Aegilops tauschii subsp. strangulata] | 0 |
| Q8W3M6 | Ubiquitin-like domain-containing CTD phosphatase OS=Arabidopsis thaliana OX=3702 GN=At4g06599 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I7BAK6 | protein-serine/threonine phosphatase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG061750.