Basic Information
Locus ID:
gene:TRIDC3BG060920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 658716547 | 658719810 | + | gene:TRIDC3BG060920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 49,994.57 Da | 60.57 | 71.07 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01167 | Tub family | 122 | 445 | 6.2E-116 | IPR000007 |
| Pfam | PF00646 | F-box domain | 58 | 111 | 1.1E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 51 | 103 | 4.45E-7 | IPR036047 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 108 | 450 | 2.35E-99 | IPR025659 |
| Gene3D | G3DSA:1.20.1280.50 | - | 54 | 106 | 2.6E-5 | - |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 117 | 444 | 1.5E-96 | IPR025659 |
| ProSitePatterns | PS01200 | Tub family signature 1. | 371 | 384 | - | IPR018066 |
| ProSitePatterns | PS01201 | Tub family signature 2. | 435 | 450 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 371 | 387 | 5.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 175 | 191 | 5.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 241 | 268 | 5.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 191 | 215 | 5.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 407 | 426 | 5.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 353 | 370 | 5.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 428 | 450 | 5.0E-76 | IPR000007 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25280.1 | tubby like protein 10. Member of TLP family | 0 |
| RefSeq | XP_037414935.1 | tubby-like F-box protein 3 [Triticum dicoccoides] | 0 |
| Q8LJA9 | Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP3 PE=2 SV=1 | 0 | |
| TrEMBL | D8L9L6 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 GN=TAA_ctg0464b.00110.1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG060920.