Basic Information
Locus ID:
gene:TRIDC3BG059860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 647505305 | 647509182 | + | gene:TRIDC3BG059860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.79 | 54,263.34 Da | 38.19 | 101.31 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 34 | 68 | 7.9E-5 | IPR001810 |
| Pfam | PF08387 | FBD | 402 | 436 | 8.0E-6 | IPR006566 |
| SUPERFAMILY | SSF52047 | RNI-like | 169 | 382 | 1.18E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 81 | 9.03E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 271 | 1.6E-5 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 27 | 74 | 3.4E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 30 | 78 | 11.537539 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.2 | - | 0 |
| RefSeq | XP_037414839.1 | F-box protein At5g03100-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9FZ70 | F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EQL2 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG059860.