Basic Information
Locus ID:
gene:TRIDC3BG055920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 602942425 | 602943446 | - | gene:TRIDC3BG055920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 20,911.36 Da | 44.68 | 81.39 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 129 | 172 | 1.54031E-19 | - |
| Pfam | PF13639 | Ring finger domain | 129 | 172 | 1.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 126 | 177 | 4.35E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 91 | 177 | 7.3E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 130 | 171 | 2.4E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 130 | 172 | 12.651561 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10910.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037414595.1 | RING-H2 finger protein ATL74-like [Triticum dicoccoides] | 0 |
| Q9SG96 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6FRK9 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG055920.