Basic Information
Locus ID:
gene:TRIDC3BG055900
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 602784861 | 602793541 | - | gene:TRIDC3BG055900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 43,444.69 Da | 47.55 | 87.01 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 14 | 50 | 6.5E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 9 | 362 | 4.58E-30 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 149 | 380 | 1.0E-17 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 101 | 5.8E-14 | IPR015943 |
| SMART | SM00320 | WD40_4 | 53 | 95 | 59.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 256 | 295 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 302 | 341 | 0.87 | IPR001680 |
| SMART | SM00320 | WD40_4 | 11 | 50 | 6.0E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 18 | 50 | 10.495596 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 18 | 59 | 13.783434 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 156 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29860.1 | Transducin/WD40 repeat-like superfamily protein. Encodes a WD repeat protein with seven WD repeat motifs, predicted to function in protein-protein interaction. Mutations caused defects in both embryo and seedling development. | 0 |
| RefSeq | XP_037414594.1 | protein DECREASED SIZE EXCLUSION LIMIT 1-like [Triticum dicoccoides] | 0 |
| F1DLK1 | Protein DECREASED SIZE EXCLUSION LIMIT 1 OS=Nicotiana benthamiana OX=4100 GN=DSE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6FVF8 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG055900.