Basic Information
Locus ID:
gene:TRIDC3BG055880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 602667982 | 602671445 | - | gene:TRIDC3BG055880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 91,687.18 Da | 47.51 | 106.48 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 581 | 845 | 1.00083E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 369 | 428 | 1.9E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 155 | 175 | 0.45 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 577 | 783 | 1.3E-40 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 202 | 224 | 0.77 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 103 | 140 | 1.4E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 193 | 438 | 4.32E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 6 | 261 | 2.89E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 578 | 844 | 1.62E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 218 | 465 | 1.0E-67 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 217 | 3.3E-57 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 652 | 855 | 1.6E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 572 | 651 | 2.5E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 391 | 415 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 318 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 31 | 55 | 0.092 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 319 | 343 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 104 | 127 | 2.8 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 575 | 847 | 35.19862 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 581 | 604 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 107 | 120 | 1.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 391 | 404 | 1.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56370.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037414592.1 | probable LRR receptor-like serine/threonine-protein kinase IRK [Triticum dicoccoides] | 0 |
| Q9LY03 | Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis thaliana OX=3702 GN=IRK PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FSM6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG055880.