Basic Information
Locus ID:
gene:TRIDC3BG054140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 586581292 | 586584204 | - | gene:TRIDC3BG054140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 33,315.17 Da | 51.32 | 103.67 | 0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01694 | Rhomboid family | 60 | 201 | 3.1E-6 | IPR022764 |
| Pfam | PF00627 | UBA/TS-N domain | 262 | 296 | 2.6E-10 | IPR015940 |
| SUPERFAMILY | SSF144091 | Rhomboid-like | 26 | 200 | 1.14E-15 | IPR035952 |
| SUPERFAMILY | SSF46934 | UBA-like | 254 | 299 | 1.56E-12 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 236 | 302 | 1.4E-13 | - |
| Gene3D | G3DSA:1.20.1540.10 | - | 25 | 211 | 7.3E-8 | IPR035952 |
| SMART | SM00165 | uba_6 | 261 | 298 | 5.8E-9 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 259 | 299 | 13.65536 | IPR015940 |
Gene Ontology
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56740.1 | Ubiquitin-associated (UBA) protein. | 0 |
| RefSeq | XP_048567000.1 | rhomboid-like protein 20 [Triticum urartu] | 0 |
| Q9LET3 | Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6GVV3 | UBA domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG054140.