Basic Information
Locus ID:
gene:TRIDC3BG053010
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Breast carcinoma amplified sequence 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 577000881 | 577007572 | - | gene:TRIDC3BG053010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 89,758.79 Da | 41.01 | 79.41 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12490 | Breast carcinoma amplified sequence 3 | 514 | 702 | 3.1E-53 | IPR022175 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 81 | 463 | 9.77E-17 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 345 | 508 | 1.8E-11 | IPR015943 |
| SMART | SM00320 | WD40_4 | 420 | 461 | 91.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 363 | 403 | 0.0017 | IPR001680 |
| SMART | SM00320 | WD40_4 | 186 | 221 | 220.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 753 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03380.1 | homolog of yeast autophagy 18 (ATG18) G. | 0 |
| RefSeq | XP_037414391.1 | autophagy-related protein 18f-like [Triticum dicoccoides] | 0 |
| Q8GUL1 | Autophagy-related protein 18g OS=Arabidopsis thaliana OX=3702 GN=ATG18G PE=2 SV=1 | 0 | |
| TrEMBL | A0A077S3X0 | BCAS3 domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF117200080CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG053010.