Basic Information
Locus ID:
gene:TRIDC3BG052880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 575188297 | 575196833 | - | gene:TRIDC3BG052880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 91,101.60 Da | 33.89 | 83.39 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 339 | 429 | 3.65826E-27 | - |
| CDD | cd00028 | B_lectin | 32 | 153 | 8.00872E-26 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 525 | 790 | 5.85447E-96 | - |
| Pfam | PF01453 | D-mannose binding lectin | 73 | 179 | 2.8E-28 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 211 | 321 | 8.8E-30 | IPR000858 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 520 | 788 | 2.9E-48 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 343 | 414 | 8.5E-21 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 74 | 184 | 5.63E-21 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 502 | 790 | 2.29E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 493 | 594 | 1.0E-35 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 18 | 149 | 4.6E-15 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 595 | 801 | 2.5E-58 | - |
| SMART | SM00220 | serkin_6 | 519 | 792 | 4.7E-29 | IPR000719 |
| SMART | SM00108 | blect_4 | 24 | 153 | 9.9E-21 | IPR001480 |
| SMART | SM00473 | ntp_6 | 345 | 428 | 1.0E-13 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 1 | 837 | 8.1E-282 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 343 | 429 | 10.752056 | IPR003609 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 288 | 324 | 9.164549 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 519 | 798 | 38.746254 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 24 | 151 | 15.995598 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 640 | 652 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 813 | 837 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037414380.1 | receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FUK5 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG052880.