Basic Information
Locus ID:
gene:TRIDC3BG052860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 575118984 | 575124316 | + | gene:TRIDC3BG052860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 92,852.74 Da | 46.73 | 82.87 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 29 | 154 | 1.9763E-29 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 337 | 423 | 1.5445E-26 | - |
| CDD | cd14066 | STKc_IRAK | 536 | 801 | 1.97359E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 533 | 800 | 2.7E-49 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 213 | 320 | 1.3E-23 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 73 | 179 | 1.7E-35 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 341 | 408 | 2.5E-22 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 74 | 185 | 5.89E-27 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 514 | 814 | 7.69E-81 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 18 | 151 | 6.7E-21 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 606 | 810 | 2.7E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 505 | 605 | 4.9E-37 | - |
| SMART | SM00473 | ntp_6 | 342 | 422 | 3.0E-11 | IPR003609 |
| SMART | SM00220 | serkin_6 | 530 | 801 | 1.0E-32 | IPR000719 |
| SMART | SM00108 | blect_4 | 29 | 154 | 4.0E-36 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 2 | 846 | 3.9E-278 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 530 | 808 | 38.138493 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 23 | 148 | 18.719336 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 341 | 423 | 10.741953 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 651 | 663 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 846 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037414377.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | W5D450 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 GN=TRAES_3BF069700030CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG052860.