Basic Information
Locus ID:
gene:TRIDC3BG052850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 574969446 | 574973256 | + | gene:TRIDC3BG052850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 93,460.73 Da | 43.49 | 85.12 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 545 | 810 | 3.38086E-92 | - |
| CDD | cd00028 | B_lectin | 36 | 159 | 9.43277E-35 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 344 | 429 | 6.52783E-24 | - |
| Pfam | PF08276 | PAN-like domain | 347 | 414 | 2.8E-21 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 217 | 325 | 9.5E-23 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 78 | 184 | 1.1E-34 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 541 | 808 | 1.7E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 516 | 810 | 6.34E-81 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 78 | 224 | 1.28E-27 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 615 | 821 | 1.9E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 499 | 614 | 1.8E-37 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 156 | 1.1E-21 | IPR036426 |
| SMART | SM00108 | blect_4 | 34 | 159 | 3.6E-37 | IPR001480 |
| SMART | SM00220 | serkin_6 | 539 | 810 | 4.8E-30 | IPR000719 |
| SMART | SM00473 | ntp_6 | 348 | 428 | 1.2E-9 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 5 | 851 | 8.8E-276 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 347 | 429 | 9.933714 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 539 | 817 | 37.940617 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 28 | 153 | 19.397072 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 660 | 672 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 832 | 852 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037414376.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A077S3W5 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 GN=TRAES_3BF069700040CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG052850.