Basic Information
Locus ID:
gene:TRIDC3BG052830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 574670101 | 574674172 | + | gene:TRIDC3BG052830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.92 | 93,807.38 Da | 42.52 | 82.41 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 543 | 808 | 4.05105E-92 | - |
| CDD | cd01098 | PAN_AP_plant | 341 | 427 | 1.95179E-24 | - |
| CDD | cd00028 | B_lectin | 38 | 158 | 3.09902E-32 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 345 | 412 | 1.3E-21 | IPR003609 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 541 | 806 | 1.4E-49 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 216 | 323 | 2.9E-24 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 77 | 183 | 5.4E-32 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 78 | 189 | 2.22E-25 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 521 | 816 | 1.89E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 498 | 612 | 4.6E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 613 | 821 | 1.6E-55 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 26 | 155 | 7.5E-18 | IPR036426 |
| SMART | SM00108 | blect_4 | 36 | 158 | 5.6E-35 | IPR001480 |
| SMART | SM00473 | ntp_6 | 346 | 426 | 9.2E-9 | IPR003609 |
| SMART | SM00220 | serkin_6 | 537 | 808 | 1.1E-31 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 2 | 851 | 1.6E-275 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 345 | 427 | 10.196392 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 30 | 152 | 17.606823 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 537 | 815 | 37.99715 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 543 | 565 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 658 | 670 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 512 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037414374.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A077RVZ3 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 GN=TRAES_3BF181800020CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG052830.