Basic Information
Locus ID:
gene:TRIDC3BG051940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 567659180 | 567662999 | - | gene:TRIDC3BG051940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 48,001.61 Da | 40.55 | 80.59 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 205 | 239 | 5.2E-10 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 436 | 473 | 4.9E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 165 | 473 | 4.12E-51 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 408 | 475 | 1.7E-16 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 255 | 404 | 2.6E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 158 | 254 | 1.3E-20 | IPR015943 |
| SMART | SM00320 | WD40_4 | 157 | 197 | 54.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 285 | 323 | 6.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 434 | 473 | 3.0E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 243 | 282 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 393 | 429 | 28.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 201 | 240 | 2.2E-10 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 208 | 249 | 15.888781 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 208 | 244 | 12.156496 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 441 | 475 | 12.657402 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 441 | 475 | 13.68318 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 227 | 241 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16405.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_044350348.1 | WD repeat-containing protein 13-like [Triticum aestivum] | 0 |
| Q9XSC3 | WD repeat-containing protein 44 OS=Bos taurus OX=9913 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6GX32 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG051940.