Basic Information
Locus ID:
gene:TRIDC3BG050870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 557354534 | 557362203 | + | gene:TRIDC3BG050870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 138,174.02 Da | 30.97 | 92.82 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 929 | 1196 | 6.50086E-94 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 10 | 247 | 1.30803E-99 | IPR001220 |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 603 | 839 | 2.47513E-101 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 317 | 519 | 1.4E-30 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 9 | 258 | 1.5E-80 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 924 | 1192 | 3.6E-49 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 602 | 851 | 6.5E-80 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 602 | 860 | 1.54E-77 | IPR013320 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 10 | 266 | 4.62E-77 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 904 | 1211 | 6.47E-80 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 543 | 7.69E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 908 | 999 | 1.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 327 | 538 | 1.6E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1000 | 1212 | 2.5E-56 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 601 | 851 | 2.4E-67 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 9 | 251 | 1.3E-65 | - |
| SMART | SM00220 | serkin_6 | 273 | 521 | 6.7E-10 | IPR000719 |
| SMART | SM00220 | serkin_6 | 923 | 1194 | 1.6E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 923 | 1203 | 37.657936 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 218 | 580 | 24.583986 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 929 | 953 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1045 | 1057 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 372 | 384 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_040258571.1 | uncharacterized protein LOC109770509 [Aegilops tauschii subsp. strangulata] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453FLJ9 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG050870.